Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015824071.1_cds_XP_016501728.1_15433
CDS Infomation

[gene=LOC107820039] [db_xref=GeneID:107820039] [protein=ankyrin-1-like] [protein_id=XP_016501728.1] [location=26388..27998] [gbkey=CDS]
Sequence

ATGGATAGACTCATAAGCTTAGAGTCATCGAACATGGTGACAATAAGAATTGAACCAGGG
CAGAAGTGCTCGGGCGAGTTAACTCTACGCAATGTTATGTACACCATGCCCGTGGCTTTC
AGGCTGCAGCCGCTGAACAAGACTCGTTACACAGTCCGTCCACAATCTGGTATTATATCT
CCGATAACCGCTGTCAAATTGGAGATCATTTACCTTCTTCCTCCTAATACAAACCTTCCA
GAGTCAATTCCTCGTTGCGATGACTCGTTTCTTTTGCATAGTGTCGTGGCTCCTGGGGCG
GCTGTGAAAGGCTCTAGTTCCACGTTGGACTCTGTTCCAATTGATTGGTTCACCACCAAG
AAGAAGCATGTATTCATTGATAGTGCTATCAAGGTTATGTTTGTTGGTTCTTCTGTACTC
TGTTATCTTGTGAGGAAAGGTTATATGGAAGAAATCAGAGAAGTACTGGAGAGGAGTGAC
CCGAAATGGAAGCCCGCCGATTCGGTTGATCATGAAGGTCAGACATTGCTTCACTTAGCC
ATTGCCCAAGGACGGCCTGATCTTGTACAGTTGCTCCTCGAATTCCAGTCTAATATAGAA
GCTCATAGCCGGTCTGGTTCAAGCCCACTTGAGGCTGCATCGGCTTCTGGCGACGCCTTA
ATTGTTGAGCTTTTGTTAGCAAACAGAGCAAGTTCAGAGCGAACAGAGTTGTCAGCTTGG
GGACCTATACATCTAGCTGCAGGAAATGGTCATTTGGAAGTGCTAAAACTTCTCATTGTA
AAAGGGGCAAATTTGAATTCCCTCACAAAAGATGGGAATACAGCTTTGCACCTTGCTGTT
CAAGAACGAAGGCGTGATTGTGCTCGCCTTTTGTTGGTGAACGGTGCCAGAGCCGATATC
CAAAATGCTGGCGATGGTGATACCCCTTTGCATATTGCTGCAGCATCCGGAGACGAACAT
ATTGTTCGGCTTTTACTTCACAAGGGAGCCGAGAAGAACATCCGTAACAAGTACGGGAAG
ACTGCGTATGATGTTACCGCTGAACATGGCTATAATAGGCTCTTTGACGCCCTTCGTTTA
GGGGACAGCCTATGTGTAGCAGCCCGAAAAGGAGATGTAAGAACCATCCAGAGGTTGATC
GGGAATGGGGCGAGCATCAACGGCCGTGACCAACACGGATGGACTGCATTGCACCGGGCG
TCCTTCAAGGGGAAGATAGACGTGGTTCGGTCTTTGATAGACATGGGAATTGAAATGGAT
GGAAAGGATGGAGAGGGTTACACCGCCTTGCACTGCGCGGTTGAGTCAGGCCATGTTGAC
GTGGCCGAGATGCTTGTAAAGAAAGGCGCGGATGTTGAAGCAAGGACTAGCAAGGGAGTC
ACTGCATTGCAGATTGCTGAGTCGTTGCATTACTCTGGCCTCACCAGGATACTCATCCAA
GGTGGGGCAGAAAGAGAAGGAACTAAGGTGGAATCACTGGCAGCACATAAACCGCTTAGG
AAAGTGGCTGCTAGAGAAATGGATATTCGTAAAATCAAGAAAAAAGCTAGTAATAACGCA
AGAGTTAGTCGGAGTAGCTTTGATAGAACTGTAACATTGTCTGTGGTGTGA

Peptide Sequence

PEP ID

XP_016501728.1
PEP Infomation

PREDICTED: ankyrin-1-like [Nicotiana tabacum]
Sequence

MDRLISLESSNMVTIRIEPGQKCSGELTLRNVMYTMPVAFRLQPLNKTRYTVRPQSGIIS
PITAVKLEIIYLLPPNTNLPESIPRCDDSFLLHSVVAPGAAVKGSSSTLDSVPIDWFTTK
KKHVFIDSAIKVMFVGSSVLCYLVRKGYMEEIREVLERSDPKWKPADSVDHEGQTLLHLA
IAQGRPDLVQLLLEFQSNIEAHSRSGSSPLEAASASGDALIVELLLANRASSERTELSAW
GPIHLAAGNGHLEVLKLLIVKGANLNSLTKDGNTALHLAVQERRRDCARLLLVNGARADI
QNAGDGDTPLHIAAASGDEHIVRLLLHKGAEKNIRNKYGKTAYDVTAEHGYNRLFDALRL
GDSLCVAARKGDVRTIQRLIGNGASINGRDQHGWTALHRASFKGKIDVVRSLIDMGIEMD
GKDGEGYTALHCAVESGHVDVAEMLVKKGADVEARTSKGVTALQIAESLHYSGLTRILIQ
GGAEREGTKVESLAAHKPLRKVAAREMDIRKIKKKASNNARVSRSSFDRTVTLSVV

Transcript Sequence

Gene sequence data has not been registered.